介绍一种单细胞基因集打分方法 wot.score_gene_sets

Source: Optimal-Transport Analysis of Single-Cell Gene Expression Identifies Developmental Trajectories in Reprogramming: Cell

描述：We then constructed curated gene signatures from various databases of gene signatures. Given a set of genes, we score cells based on their gene expression. In particular, for a given cell we compute the z-score for each gene in the set. We then truncate these z-scores at 5 or −5, and define the signature of the cell to be the mean z-score over all genes in the gene set.

函数：wot.score_gene_sets

Repository: https://github.com/broadinstitute/wot/